PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0021s0117.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 280aa    MW: 30205 Da    PI: 4.3046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0021s0117.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1782132155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+ +++g
  Kalax.0021s0117.1.p  82 STYRGVRKRA-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAAMAIKG 132
                          56*****887.**********843...6**********************99887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.19E-3182140No hitNo description
SuperFamilySSF541711.44E-2182141IPR016177DNA-binding domain
PROSITE profilePS5103224.09283140IPR001471AP2/ERF domain
SMARTSM003809.9E-3783146IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.5E-3283141IPR001471AP2/ERF domain
PfamPF008472.4E-1283132IPR001471AP2/ERF domain
PRINTSPR003671.9E-108495IPR001471AP2/ERF domain
PRINTSPR003671.9E-10106122IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MDELTQSHLQ SVSLPPPPKI HSSTSSSSSS TDSMASSYAD QIAISNSSEC SAAENGAATG  60
ATVSAETESL SKRRRDIDEK HSTYRGVRKR AWGKWVSEIR EPRKKSRIWL GTYPTAEMAA  120
RAHDVAAMAI KGRSAVLNFP QLADRLPRPA SQCPKDIQAA AAEAAASTFE TTGEEEEEAT  180
HSISASSSLE SLLEHSNSTA QTDQLWEDYL FDLPELEAVG GDAFYDLPDL FEEDGGMSGA  240
GDLSSLYSSA WQLAGAATND AFRVEDPILW DYNNYLIDI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1584140360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00312DAPTransfer from AT2G44940Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771308.15e-57PREDICTED: ethylene-responsive transcription factor ERF039-like
RefseqXP_016435910.15e-57PREDICTED: ethylene-responsive transcription factor ERF039-like
SwissprotQ8LBQ71e-53ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLF6GV812e-56F6GV81_VITVI; Putative uncharacterized protein
STRINGVIT_15s0021g02110.t015e-56(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-32ERF family protein